BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020H03LP1|AL427678
(978 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1069 419 e-117
>3x_Contig1069
Length = 3994
Score = 419 bits (211), Expect = e-117
Identities = 235/241 (97%), Gaps = 2/241 (0%)
Strand = Plus / Minus
Query: 737 aatgcacagaagagatttggcaacaaaggttttgtacattcaaaacattctcaagatgtt 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3994 aatgcacagaagagatttggcaacaaaggttttgtacattcaaaacattctcaagatgtt 3935
Query: 797 gaactcctaagagaagatcaaaaggagtacgagaaggctgtcaaacaagaagaatggact 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3934 gaactcctaagagaagatcaaaaggagtacgagaaggctgtcaaacaagaagaatggact 3875
Query: 857 agaagacacaacgaaaagatcctaaacaactggatcggtggcggatctgcagaaa-ttat 915
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 3874 agaagacacaacgaaaagatcctaaacaactggatcggtggcggatctgcagggggttat 3815
Query: 916 atctcgccgtttgccatcgatggtttaaagc-mcacaatgttcgtgttggtagaggacgt 974
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 3814 atctcgccgtttgccatcgatggtttaaagcaccacaatgttcgtgttggtagaggacgt 3755
Query: 975 t 975
|
Sbjct: 3754 t 3754
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8633
Number of Sequences: 1807
Number of extensions: 8633
Number of successful extensions: 100
Number of sequences better than 1.0e-20: 1
length of query: 978
length of database: 10,358,551
effective HSP length: 16
effective length of query: 962
effective length of database: 10,329,639
effective search space: 9937112718
effective search space used: 9937112718
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)